Fitness data for PS417_03915 in Pseudomonas simiae WCS417

tRNA-Thr

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -1.6 compare
phage P. simiae ORA MOI 0.1 -0.9 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.1 compare
liquid stress Fraxetin 0.5 mM; liquid stress -0.8 -1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.8 compare
carbon source succinate (C) -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +3.4 compare
carbon source octanoate (C) +0.8 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.4 compare
stress Gentamicin 0.008 mg/ml +1.0 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.3 +1.8 compare