Fitness data for PS417_03815 in Pseudomonas simiae WCS417

DNA transporter
SEED: Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)
KEGG: putative lipoprotein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
soil soil sample 2; outgrowth in LB -2.1 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.6 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.5 -2.6 compare
root root sample 6; outgrowth in LB -1.5 -2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.5 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.5 -2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.4 -2.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -1.4 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.4 -2.6 compare
phage P. simiae OR Antrim MOI 10 -1.4 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.8 compare
phage JP1 MOI 1 +1.4 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +1.9 compare
phage JP1 MOI 0.1 +1.6 +3.1 compare
phage JP1 MOI 1 +1.9 +2.1 compare