Fitness data for PS417_03800 in Pseudomonas simiae WCS417

pilus assembly protein
SEED: Type IV pilus biogenesis protein PilE
KEGG: type IV pilus assembly protein PilE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -1.1 -3.5 compare
phage P. simiae ORA MOI 1 -0.8 -1.7 compare
stress Bacitracin 2 mg/ml -0.7 -1.9 compare
phage P. simiae OR Antrim MOI 1 -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.4 compare
soil soil sample 3; outgrowth in LB -0.6 -1.3 compare
phage JP1 MOI 10 -0.6 -1.6 compare
motility inner cut, LB soft agar motility assay -0.6 -1.2 compare
phage Wcs_1 -0.5 -1.1 compare
liquid stress Fraxetin 2 mM; liquid stress -0.5 -2.0 compare
carbon source L-Valine (C) +0.6 +0.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +1.1 compare
soil soil sample 2; outgrowth in LB +0.6 +2.3 compare
nophagecontrol Only library +0.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.2 compare
seeds Growth on radish seeds for 72 hours +0.7 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.1 +1.6 compare