Fitness data for PS417_03525 in Pseudomonas simiae WCS417

hypothetical protein
SEED: type III secretion protein HrpG

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -2.2 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.8 -1.4 compare
soil soil sample 8; outgrowth in LB -1.7 -1.1 compare
carbon source Carbon source D-Mannitol 2.5 mM -1.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.5 compare
solid stress 80% Methanol 3 mM; solid stress -1.5 -1.9 compare
phage JP1 MOI 10 -1.5 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.4 -1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.4 -1.8 compare
carbon source D-Galactose (C) -1.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.0 compare
soil soil sample 6; outgrowth in LB +1.3 +1.2 compare
root root sample 6; outgrowth in LB +1.3 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.6 +1.4 compare
soil soil sample 7; outgrowth in LB +1.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +2.0 compare