Fitness data for PS417_03515 in Pseudomonas simiae WCS417

type III secretion protein
SEED: type III secretion protein HrpT

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source L-Valine (C) -1.6 -1.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.6 -1.5 compare
phage JP1 MOI 10 -1.4 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.0 compare
phage Wcs_1 -1.2 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -1.2 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.1 compare
nophagecontrol TIme6-nophage -1.1 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -1.1 compare
phage P. simiae OR Antrim MOI 1 -1.0 -1.0 compare
root root sample 6; outgrowth in LB -1.0 -0.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.3 +2.6 compare
seeds Growth on radish seeds for 72 hours +2.3 +4.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +3.3 +11.7 compare