Fitness data for PS417_03495 in Pseudomonas simiae WCS417

type III secretory protein EscS
SEED: Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
KEGG: type III secretion protein SctS

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.1 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.7 compare
carbon source L-Leucine (C) -1.3 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.6 compare
soil soil sample 7; outgrowth in LB -1.2 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -2.5 compare
carbon source D-Ribose (C) -1.1 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.8 compare
phage JP1 MOI 1 -1.1 -1.7 compare
phage JP1 MOI 0.1 -1.1 -1.3 compare
phage P. simiae ORA MOI 0.1 -1.1 -1.7 compare
soil soil sample 5; outgrowth in LB +1.0 +1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.3 compare
soil soil sample 6; outgrowth in LB +1.2 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.5 +2.4 compare