Fitness data for PS417_03100 in Pseudomonas simiae WCS417

pilus assembly protein
SEED: Flp pilus assembly protein CpaE
KEGG: pilus assembly protein CpaE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -3.5 -1.0 compare
phage P. simiae Grant Run MOI 10 -3.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.5 -1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.1 -0.8 compare
stress methylglyoxal 0.032 vol% -2.9 -0.7 compare
phage JP1 MOI 1 -2.6 -0.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.5 -1.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -2.4 -1.0 compare
no phage control Time6-nophage -2.3 -1.4 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -2.2 -1.4 compare
carbon source succinate (C) -2.1 -1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 -2.0 -1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.0 -0.7 compare
carbon source RCH2_defined_glucose with MS_media 1x -1.9 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -0.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.8 -1.4 compare
no phage control no phage control -1.8 -1.3 compare
carbon source L-Valine (C) +1.9 +1.6 compare