Fitness data for PS417_00310 in Pseudomonas simiae WCS417

cysteine synthase
SEED: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
KEGG: cytochrome c oxidase subunit XI assembly protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil soil sample 2; outgrowth in LB -2.5 -4.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.1 -3.7 compare
soil soil sample 6; outgrowth in LB -1.7 -2.8 compare
soil soil sample 7; outgrowth in LB -1.6 -3.4 compare
soil soil sample 8; outgrowth in LB -1.3 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.2 -2.9 compare
soil soil sample 5; outgrowth in LB -1.0 -1.9 compare
root root sample 6; outgrowth in LB -1.0 -2.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.9 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.8 compare
soil soil sample 3; outgrowth in LB -0.7 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.6 compare
phage P. simiae Grant Run MOI 10 +0.6 +2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.7 +2.9 compare
solid stress Fraxetin 1 mM; solid stress +0.7 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.8 +1.5 compare