Fitness data for PS417_28515 in Pseudomonas simiae WCS417

16S rRNA methyltransferase
SEED: rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
KEGG: ribosomal RNA small subunit methyltransferase G

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.6 -2.1 compare
stress Gentamicin 0.008 mg/ml -2.5 -4.3 compare
solid stress Fraxetin 3 mM; solid stress -2.2 -3.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.2 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.0 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -3.5 compare
stress Doxycycline hyclate 0.001 mg/ml -1.7 -2.5 compare
carbon source octanoate (C) -1.6 -5.2 compare
phage P. simiae ORA MOI 10 -1.6 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.4 -3.0 compare
carbon source octanoate (C) -1.4 -3.2 compare
no phage control Time6-nophage -1.4 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -2.6 compare
stress Nalidixic 0.015 mg/ml -1.3 -5.5 compare
phage P. simiae OR Antrim MOI 10 -1.3 -2.4 compare
carbon source Putrescine (C) -1.3 -3.0 compare
liquid stress Fraxetin 3 mM; liquid stress +1.3 +3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +3.8 compare
nitrogen source Adenine (N) +1.5 +6.0 compare