Fitness data for PS417_28435 in Pseudomonas simiae WCS417

penicillin-binding protein
SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
KEGG: penicillin-binding protein 1C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -0.5 -2.1 compare
carbon source acetate (C) -0.4 -2.5 compare
stress methylglyoxal 0.032 vol% -0.4 -1.8 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 -2.0 compare
carbon source Trisodium citrate (C) -0.3 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.8 compare
phage JP1 MOI 10 -0.3 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.7 compare
phage Wcs_1 -0.3 -1.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 -1.9 compare
stress Cobalt chloride 0.16 mM -0.3 -1.9 compare
carbon source Ethanol (C) -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.2 compare
soil soil sample 5; outgrowth in LB +0.3 +1.7 compare