Fitness data for PS417_28425 in Pseudomonas simiae WCS417

lysine transporter LysE
SEED: L-lysine permease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.8 compare
phage P. simiae OR Antrim MOI 10 -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.4 compare
phage P. simiae Grant Run MOI 0.1 -0.7 -1.8 compare
motility outer cut, LB soft agar motility assay -0.7 -2.6 compare
phage P. simiae OR Antrim MOI 1 -0.7 -1.4 compare
nophagecontrol TIme6-nophage -0.6 -2.3 compare
motility inner cut, LB soft agar motility assay -0.6 -3.2 compare
phage P. simiae ORA MOI 1 -0.6 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.3 compare
seeds Growth on radish seeds for 24 hours +0.8 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.2 +7.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.2 +4.9 compare