Fitness data for PS417_28275 in Pseudomonas simiae WCS417

cobalamin biosynthesis protein CobW
SEED: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.5 compare
phage JP1 MOI 1 -1.2 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -1.5 compare
seeds Growth on radish seeds for 72 hours -1.1 -1.6 compare
ecofab LB in EcoFAB_3.5mL -1.1 -3.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.1 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.3 compare
motility outer cut, LB soft agar motility assay -1.0 -2.7 compare
phage P. simiae OR1 MOI 0.1 -1.0 -1.1 compare
seeds Growth on radish seeds for 72 hours -0.9 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +3.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +2.9 compare
phage JP1 MOI 10 +1.0 +3.0 compare
phage P. simiae Grant Run MOI 0.1 +1.1 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.0 +1.8 compare