Fitness data for PS417_27925 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
KEGG: type VI secretion system protein ImpK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -1.3 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -2.4 compare
phage JP1 MOI 1 -1.0 -1.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.0 -2.2 compare
stress methylglyoxal 0.032 vol% -0.9 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
solid stress Fraxetin 0.5 mM; solid stress -0.8 -3.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -1.6 compare
carbon source succinate (C) -0.7 -2.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.7 -2.2 compare
soil soil sample 7; outgrowth in LB +0.7 +1.3 compare
carbon source Carbon source L-Citrulline 10 mM +0.7 +1.4 compare
carbon source Carbon source L-Ornithine 10 mM +0.7 +2.5 compare
carbon source D,L-Lactate (C) +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.6 compare
phage P. simiae ORA MOI 0.1 +0.9 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +1.2 compare