Fitness data for PS417_02755 in Pseudomonas simiae WCS417

membrane protein
SEED: Permease of the drug/metabolite transporter (DMT) superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.1 compare
soil soil sample 8; outgrowth in LB -0.6 -2.0 compare
carbon source Carbon source D-Mannitol 5 mM -0.6 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.0 compare
motility inner cut, LB soft agar motility assay -0.4 -2.1 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.4 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
motility inner cut, LB soft agar motility assay +0.4 +2.0 compare
phage JP1 MOI 10 +0.4 +1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.2 compare
stress Doxycycline hyclate 0.001 mg/ml +0.5 +2.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.8 compare
root root sample 6; outgrowth in LB +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare