Fitness data for PS417_27595 in Pseudomonas simiae WCS417

recombinase XerC
SEED: Tyrosine recombinase XerC
KEGG: integrase/recombinase XerC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.0 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.6 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.0 -2.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.3 -3.3 compare
stress Cisplatin 0.01 mg/ml -2.3 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -1.8 compare
stress methylglyoxal 0.032 vol% -2.1 -2.3 compare
solid stress 80% Methanol 3 mM; solid stress -2.0 -3.3 compare
phage JP1 MOI 10 -2.0 -1.9 compare
stress Nalidixic 0.025 mg/ml -2.0 -4.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -2.0 -2.5 compare
carbon source L-Valine (C) -2.0 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.9 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.9 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.6 compare
soil soil sample 5; outgrowth in LB -1.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.1 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.7 +2.5 compare