Fitness data for PS417_27510 in Pseudomonas simiae WCS417

disulfide bond formation protein B
SEED: Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
KEGG: disulfide bond formation protein DsbB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -2.6 -6.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -2.7 compare
no stress control on plate growth on LB_noSalt plate -1.3 -5.4 compare
soil soil sample 3; outgrowth in LB -1.2 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.8 compare
no stress control on plate growth on LB_noSalt plate -1.1 -4.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -1.8 compare
motility outer cut, LB soft agar motility assay -1.0 -4.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.6 compare
stress Neomycin 0.04 mg/ml -0.9 -4.7 compare
phage P. simiae Grant Run MOI 10 -0.9 -2.0 compare
stress Spectinomycin 0.4 mg/ml -0.8 -3.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.4 compare
phage P. simiae OR1 MOI 0.1 +0.9 +2.1 compare
phage Wcs_1 +1.0 +1.8 compare