Fitness data for PS417_27505 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Regulator of sigma D
KEGG: regulator of sigma D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -2.3 compare
solid stress Fraxetin 3 mM; solid stress -1.6 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -3.3 compare
phage P. simiae OR Antrim MOI 10 -1.4 -2.6 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -3.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -2.0 compare
solid stress Fraxetin 2 mM; solid stress -1.0 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +3.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +3.5 compare
soil soil sample 7; outgrowth in LB +1.0 +2.2 compare
soil soil sample 3; outgrowth in LB +1.1 +3.4 compare
soil soil sample 4; outgrowth in LB +1.2 +3.6 compare
soil soil sample 6; outgrowth in LB +1.3 +4.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.5 +4.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.7 +3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.2 +7.1 compare
root root sample 6; outgrowth in LB +2.4 +8.9 compare