Fitness data for PS417_27410 in Pseudomonas simiae WCS417

outer membrane usher protein
SEED: Beta-fimbriae usher protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.3 -1.7 compare
phage P. simiae ORA MOI 1 -0.3 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.5 compare
solid stress Scopoletin 2 mM; solid stress +0.2 +1.8 compare
phage P. simiae OR1 MOI 0.1 +0.2 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +1.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.6 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.3 +1.9 compare
no stress control TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 +0.3 +2.1 compare
carbon source Carbon source D-Mannitol 5 mM +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.0 compare
nophagecontrol Only library +0.3 +1.8 compare
carbon source Carbon source D-Mannitol 5 mM +0.3 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.4 compare
phage JP1 MOI 10 +0.3 +1.8 compare
phage P. simiae OR Antrim MOI 10 +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.6 compare