Fitness data for PS417_27380 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family
KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.2 compare
root root sample 6; outgrowth in LB -0.9 -0.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -1.1 compare
soil soil sample 6; outgrowth in LB -0.8 -1.2 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -1.5 compare
nophagecontrol Only library -0.8 -1.0 compare
stress methylglyoxal 0.032 vol% -0.7 -1.0 compare
phage JP1 MOI 10 -0.7 -0.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +2.3 compare
phage P. simiae OR Antrim MOI 0.1 +0.7 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.9 compare
phage P. simiae OR Antrim MOI 1 +0.8 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.1 compare
motility inner cut, LB soft agar motility assay +1.2 +2.2 compare