Fitness data for PS417_02710 in Pseudomonas simiae WCS417

Urease maturation and nickel insertion protein UreE (from data)
Original annotation: urease accessory protein UreE
SEED: Urease accessory protein UreE
KEGG: urease accessory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Inosine (N) -4.6 -7.7 compare
nitrogen source Urea (N) -4.4 -8.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.8 -2.3 compare
root root sample 6; outgrowth in LB -0.8 -1.7 compare
phage P. simiae ORA MOI 0.1 -0.7 -1.9 compare
carbon source Inosine (C) -0.7 -2.8 compare
seeds Growth on radish seeds for 24 hours -0.7 -2.1 compare
motility inner cut, LB soft agar motility assay -0.6 -1.4 compare
phage JP1 MOI 1 +0.7 +1.6 compare
phage P. simiae Grant Run MOI 10 +0.8 +2.1 compare
carbon source L-Valine (C) +0.8 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.8 +2.7 compare