Fitness data for PS417_02705 in Pseudomonas simiae WCS417

urease accessory protein UreF
SEED: Urease accessory protein UreF
KEGG: urease accessory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -4.6 -2.5 compare
nitrogen source Urea (N) -3.9 -2.7 compare
nitrogen source Inosine (N) -2.5 -3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.5 compare
phage P. simiae OR1 MOI 0.1 -1.1 -1.0 compare
phage P. simiae OR Antrim MOI 1 -1.1 -1.1 compare
phage P. simiae Grant Run MOI 10 -1.0 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.0 -1.8 compare
carbon source D-Gluconic Acid (C) -1.0 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.0 -1.2 compare
carbon source RCH2_defined_glucose with MS_media 1x +1.0 +2.9 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.0 +2.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +1.1 +2.1 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +1.1 +2.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +1.2 +2.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.4 +2.4 compare