Fitness data for PS417_27125 in Pseudomonas simiae WCS417

spermidine/putrescine ABC transporter substrate-binding protein
SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)
KEGG: putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Putrescine (C) -4.1 -11.5 compare
carbon source Putrescine (C) -4.1 -9.5 compare
nitrogen source Putrescine (N) -3.5 -7.8 compare
solid stress Fraxetin 3 mM; solid stress -1.7 -5.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -6.5 compare
solid stress Fraxetin 3 mM; solid stress -1.2 -5.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -5.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -3.8 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -4.7 compare
seeds Growth on radish seeds for 72 hours -1.0 -5.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.0 -4.1 compare
soil soil sample 6; outgrowth in LB -0.9 -3.6 compare
solid stress Fraxetin 3 mM; solid stress -0.9 -5.4 compare
liquid stress Fraxetin 3 mM; liquid stress -0.9 -4.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -4.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -3.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.5 compare
liquid stress Fraxetin 3 mM; liquid stress -0.8 -3.9 compare
stress Gentamicin 0.008 mg/ml +1.0 +3.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.1 +7.2 compare