Fitness data for PS417_27120 in Pseudomonas simiae WCS417

ABC transporter substrate-binding protein
SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)
KEGG: putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Putrescine (C) -2.8 -4.4 compare
carbon source Putrescine (C) -2.5 -4.1 compare
nitrogen source Putrescine (N) -2.1 -3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.2 compare
solid stress Fraxetin 3 mM; solid stress -0.6 -1.8 compare
stress Cisplatin 0.01 mg/ml -0.6 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.1 compare
phage P. simiae ORA MOI 0.1 -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.8 compare
phage Wcs_0.1 +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.9 +3.7 compare
stress Gentamicin 0.008 mg/ml +1.3 +4.6 compare