Fitness data for PS417_02695 in Pseudomonas simiae WCS417

protein hupE
KEGG: urease accessory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
nitrogen source Inosine (N) -6.3 -2.5 compare
nitrogen source Urea (N) -3.9 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -1.1 compare
nophagecontrol Only library -2.0 -1.6 compare
phage JP1 MOI 0.1 -1.7 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.5 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.3 compare
phage P. simiae OR Antrim MOI 1 -1.4 -1.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.4 -1.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.1 compare
stress Phosphomycin 0.003 mg/ml -1.2 -2.1 compare
phage P. simiae OR Antrim MOI 0.1 -1.1 -1.1 compare
solid stress 80% Methanol 1 mM; solid stress +1.1 +3.2 compare
carbon source 2-Deoxy-D-Ribose (C) +1.2 +2.5 compare
soil soil sample 3; outgrowth in LB +1.2 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +2.2 compare
seeds Growth on radish seeds for 72 hours +1.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.8 +2.8 compare