Fitness data for PS417_27020 in Pseudomonas simiae WCS417

DNA-binding protein
SEED: Outer membrane protein assembly factor YaeT precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
carbon source Gly-Glu (C) -0.5 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.4 -1.9 compare
nophagecontrol Only library -0.4 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.1 compare
seeds Growth on radish seeds for 24 hours +0.5 +1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +3.1 compare
phage P. simiae ORA MOI 0.1 +0.5 +2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.3 compare
phage P. simiae OR Antrim MOI 10 +0.6 +2.6 compare
seeds Growth on radish seeds for 72 hours +0.7 +3.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.5 compare
phage JP1 MOI 1 +0.7 +1.9 compare
root root sample 6; outgrowth in LB +0.8 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.6 compare