Fitness data for PS417_26915 in Pseudomonas simiae WCS417

GTPase SAR1
SEED: probable integral membrane protein NMA1898

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -0.9 -2.5 compare
motility outer cut, LB soft agar motility assay -0.9 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -1.2 compare
carbon source Carbon source D-Mannitol 10 mM -0.7 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.9 compare
phage JP1 MOI 10 -0.7 -1.5 compare
carbon source L-Valine (C) -0.6 -1.6 compare
carbon source L-Valine (C) -0.6 -1.5 compare
soil soil sample 4; outgrowth in LB +0.7 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.7 +1.2 compare
soil soil sample 7; outgrowth in LB +0.8 +2.1 compare
root root sample 6; outgrowth in LB +0.8 +1.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.8 +1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.8 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +2.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.1 +2.6 compare