Fitness data for PS417_26495 in Pseudomonas simiae WCS417

type III secretion system effector protein exou
SEED: EXOU

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Doxycycline hyclate 0.001 mg/ml -0.4 -1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.8 compare
stress R2A with Fusaric 120 ug/mL -0.4 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.6 compare
carbon source L-Valine (C) +0.4 +1.1 compare
phage P. simiae Grant Run MOI 0.1 +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +0.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.3 compare
root root sample 6; outgrowth in LB +0.5 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +3.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.2 compare
phage P. simiae ORA MOI 10 +0.5 +2.0 compare
soil soil sample 2; outgrowth in LB +0.6 +1.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +3.1 compare