Fitness data for PS417_26320 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)
KEGG: glycine betaine/proline transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
supernatant control Vogels_fungal_media 0.1X +0.7 +2.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 +2.5 compare
soil soil sample 3; outgrowth in LB +0.7 +2.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.8 +2.8 compare
soil soil sample 7; outgrowth in LB +0.9 +3.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +2.1 compare
soil soil sample 6; outgrowth in LB +1.2 +3.8 compare
soil soil sample 5; outgrowth in LB +1.3 +5.1 compare
root root sample 6; outgrowth in LB +1.4 +4.7 compare
soil soil sample 4; outgrowth in LB +2.5 +9.2 compare