Fitness data for PS417_26295 in Pseudomonas simiae WCS417

gamma-butyrobetaine dioxygenase
SEED: Gamma-butyrobetaine,2-oxoglutarate dioxygenase (EC 1.14.11.1)
KEGG: gamma-butyrobetaine dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
root root sample 6; outgrowth in LB -1.2 -1.4 compare
motility inner cut, LB soft agar motility assay -1.1 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.0 compare
phage JP1 MOI 10 -1.1 -2.3 compare
carbon source Cytidine (C) -1.0 -2.6 compare
carbon source Gly-Glu (C) -0.9 -2.1 compare
stress L-Lysine 60 mM -0.9 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.2 compare
carbon source Inosine (C) -0.8 -2.6 compare
stress Nalidixic 0.025 mg/ml -0.8 -2.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.8 compare
stress Bacitracin 2 mg/ml -0.8 -1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +1.2 compare
carbon source RCH2_defined_glucose with MS_media 1x +0.8 +2.7 compare
no stress control on plate growth on LB_noSalt plate +0.8 +4.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.6 compare