Fitness data for PS417_26275 in Pseudomonas simiae WCS417

glycine/betaine ABC transporter substrate-binding protein
SEED: L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
KEGG: glycine betaine/proline transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.8 compare
solid stress Scopoletin 3 mM; solid stress -0.9 -2.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 -1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.2 compare
stress Gentamicin 0.008 mg/ml -0.8 -1.7 compare
phage Wcs_1 -0.8 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.5 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.8 +1.8 compare
phage P. simiae OR Antrim MOI 10 +0.9 +2.5 compare
carbon source Carbon source L-Ornithine 5 mM +0.9 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.0 +2.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +1.0 +2.1 compare
seeds Growth on radish seeds for 24 hours +1.2 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.5 compare
seeds Growth on radish seeds for 72 hours +1.3 +2.7 compare
phage P. simiae OR1 MOI 0.1 +1.3 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.4 compare