Fitness data for PS417_26215 in Pseudomonas simiae WCS417

ferredoxin
SEED: GbcB Glycine betaine demethylase subunit B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.8 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -3.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -2.3 compare
soil soil sample 5; outgrowth in LB -0.8 -1.8 compare
soil soil sample 3; outgrowth in LB -0.8 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.6 compare
soil soil sample 6; outgrowth in LB -0.7 -2.0 compare
soil soil sample 7; outgrowth in LB -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.7 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.9 compare
phage Wcs_0.1 +0.8 +2.9 compare