Fitness data for PS417_26185 in Pseudomonas simiae WCS417

sarcosine oxidase subunit delta
SEED: Sarcosine oxidase delta subunit (EC 1.5.3.1)
KEGG: sarcosine oxidase, subunit delta

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.7 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -2.1 compare
soil soil sample 4; outgrowth in LB -0.9 -3.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.8 -1.9 compare
phage P. simiae ORA MOI 0.1 -0.6 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.6 compare
stress Gentamicin 0.008 mg/ml -0.6 -1.4 compare
motility outer cut, LB soft agar motility assay -0.5 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.7 compare
carbon source L-Valine (C) +0.7 +1.4 compare
phage P. simiae ORA MOI 1 +0.7 +1.5 compare
stress methylglyoxal 0.032 vol% +0.8 +2.3 compare
solid stress 80% Methanol 2 mM; solid stress +0.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +1.8 compare