Fitness data for PS417_26180 in Pseudomonas simiae WCS417

sarcosine oxidase subunit alpha
SEED: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
KEGG: sarcosine oxidase, subunit alpha

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.2 -6.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -3.8 compare
soil soil sample 2; outgrowth in LB -0.7 -3.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 -4.2 compare
phage JP1 MOI 10 -0.6 -3.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.6 -3.4 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 -2.5 compare
soil soil sample 6; outgrowth in LB -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.2 compare
soil soil sample 4; outgrowth in LB -0.5 -2.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.3 compare
soil soil sample 8; outgrowth in LB -0.5 -1.9 compare
soil soil sample 3; outgrowth in LB -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare