Fitness data for PS417_26170 in Pseudomonas simiae WCS417

formyltetrahydrofolate deformylase
SEED: Formyltetrahydrofolate deformylase (EC 3.5.1.10)
KEGG: formyltetrahydrofolate deformylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
motility inner cut, LB soft agar motility assay -0.5 -1.9 compare
liquid stress Fraxetin 2 mM; liquid stress +0.4 +1.2 compare
liquid stress 80% Methanol 2 mM; liquid stress +0.4 +1.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +1.5 compare
liquid stress 80% Methanol 2 mM; liquid stress +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.1 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.6 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +1.0 compare
stress Nalidixic 0.015 mg/ml +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +1.4 compare
phage P. simiae OR Antrim MOI 0.1 +0.5 +2.3 compare
liquid stress Fraxetin 2 mM; liquid stress +0.6 +1.5 compare
phage JP1 MOI 1 +0.8 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +1.9 compare