Fitness data for PS417_02595 in Pseudomonas simiae WCS417

NAD synthetase
SEED: FIG00958717: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
motility outer cut, LB soft agar motility assay -0.5 -3.0 compare
stress methylglyoxal 0.032 vol% -0.5 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.1 compare
motility outer cut, LB soft agar motility assay -0.4 -2.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -1.9 compare
phage P. simiae OR Antrim MOI 10 -0.4 -2.0 compare
soil soil sample 8; outgrowth in LB +0.4 +1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.4 compare
root root sample 6; outgrowth in LB +0.4 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.7 compare
seeds Growth on radish seeds for 72 hours +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
carbon source L-Valine (C) +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
seeds Growth on radish seeds for 72 hours +0.6 +2.8 compare
seeds Growth on radish seeds for 72 hours +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.4 compare