Fitness data for PS417_26060 in Pseudomonas simiae WCS417

DNA polymerase III subunit epsilon
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -2.1 compare
phage P. simiae Grant Run MOI 10 -1.8 -2.4 compare
carbon source pyruvate (C) -1.4 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -1.9 compare
soil soil sample 3; outgrowth in LB -1.2 -1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.1 -1.4 compare
carbon source pyruvate (C) -1.0 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.1 compare
soil soil sample 2; outgrowth in LB +1.0 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.1 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.4 +1.1 compare
soil soil sample 7; outgrowth in LB +1.6 +4.3 compare
root root sample 6; outgrowth in LB +1.8 +5.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +2.8 +10.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +2.8 +3.0 compare