Fitness data for PS417_25755 in Pseudomonas simiae WCS417

spermidine/putrescine ABC transporter substrate-binding protein
SEED: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -0.8 -3.8 compare
stress methylglyoxal 0.032 vol% -0.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.2 compare
motility outer cut, LB soft agar motility assay -0.4 -2.1 compare
carbon source L-Valine (C) -0.4 -1.6 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.4 -2.1 compare
phage JP1 MOI 0.1 -0.4 -1.5 compare
phage P. simiae OR Antrim MOI 10 -0.3 -1.9 compare
carbon source Carbon source L-Citrulline 5 mM -0.3 -2.2 compare
phage JP1 MOI 10 -0.3 -1.2 compare
carbon source 2-Deoxy-D-Ribose (C) -0.3 -2.5 compare
carbon source Carbon source L-Ornithine 5 mM -0.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.5 compare
motility outer cut, LB soft agar motility assay -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.0 compare
phage P. simiae OR1 MOI 0.1 +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare