Fitness data for PS417_25750 in Pseudomonas simiae WCS417

polyamine ABC transporter substrate-binding protein
SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.1 -10.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -5.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -4.3 compare
soil soil sample 5; outgrowth in LB -1.0 -3.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -4.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -4.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 -2.3 compare
carbon source Gly-Glu (C) -0.5 -3.4 compare
carbon source L-Arabinose (C) -0.5 -3.4 compare
carbon source L-Arabinose (C) -0.5 -3.2 compare
carbon source Inosine (C) -0.4 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.6 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -2.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +3.8 compare