Fitness data for PS417_02560 in Pseudomonas simiae WCS417

23S rRNA methyltransferase
SEED: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
KEGG: RNA methyltransferase, TrmH family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -4.5 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -4.5 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -4.3 -1.6 compare
soil soil sample 4; outgrowth in LB -4.0 -2.2 compare
soil soil sample 5; outgrowth in LB -4.0 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -3.4 -2.3 compare
motility outer cut, LB soft agar motility assay -3.3 -3.3 compare
solid stress 80% Methanol 2 mM; solid stress -3.2 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -3.2 -1.6 compare
soil soil sample 7; outgrowth in LB -3.1 -1.9 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.9 -2.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.8 -1.9 compare
phage JP1 MOI 1 -2.8 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -1.8 compare
phage JP1 MOI 10 -2.5 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.5 -1.7 compare