Fitness data for PS417_25210 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: Outer membrane vitamin B12 receptor BtuB
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
nitrogen source Adenine (N) -0.5 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.2 compare
carbon source Carbon source L-Ornithine 10 mM -0.4 -2.3 compare
phage P. simiae OR1 MOI 0.1 -0.3 -1.6 compare
phage JP1 MOI 0.1 +0.3 +1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.8 compare
motility inner cut, LB soft agar motility assay +0.4 +2.7 compare
phage P. simiae ORA MOI 1 +0.4 +1.8 compare
phage P. simiae Grant Run MOI 10 +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.2 compare
carbon source L-Valine (C) +0.5 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.2 compare
phage JP1 MOI 10 +0.5 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.9 compare