Fitness data for PS417_25110 in Pseudomonas simiae WCS417

capsular biosynthesis protein
KEGG: protein-tyrosine phosphatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -3.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.5 compare
soil soil sample 6; outgrowth in LB -0.6 -1.7 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.5 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.5 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.1 compare
stress Tetracycline 0.001 mg/ml +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
stress methylglyoxal 0.032 vol% +0.6 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.9 compare
stress Gentamicin 0.008 mg/ml +0.7 +1.7 compare
stress Doxycycline hyclate 0.001 mg/ml +0.7 +1.4 compare
phage Wcs_1 +0.9 +1.6 compare