Fitness data for PS417_25060 in Pseudomonas simiae WCS417

O-antigen polymerase
SEED: RbmD, similar to Lipid A core - O-antigen ligase and related enzymes

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -2.5 compare
stress Gentamicin 0.008 mg/ml -0.3 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.0 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 +1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.9 compare
soil soil sample 4; outgrowth in LB +0.3 +1.5 compare
soil soil sample 8; outgrowth in LB +0.3 +1.8 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.3 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
soil soil sample 7; outgrowth in LB +0.3 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +2.1 compare
stress LB_noSalt with Chloride 1100 mM +0.4 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.3 compare