Fitness data for PS417_25055 in Pseudomonas simiae WCS417

transposase
SEED: Mobile element protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.6 compare
soil soil sample 3; outgrowth in LB -0.7 -1.0 compare
solid stress 80% Methanol 3 mM; solid stress -0.7 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -2.5 compare
seeds Growth on radish seeds for 72 hours -0.7 -1.5 compare
phage Wcs_1 +0.7 +2.1 compare
carbon source Trisodium citrate (C) +0.7 +2.9 compare
phage P. simiae OR1 MOI 0.1 +0.7 +0.8 compare
motility outer cut, LB soft agar motility assay +0.7 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.7 +2.0 compare
phage JP1 MOI 10 +0.7 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.9 +1.9 compare