Fitness data for PS417_25030 in Pseudomonas simiae WCS417

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -1.1 -2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.0 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.4 compare
motility outer cut, LB soft agar motility assay -0.9 -3.1 compare
phage P. simiae OR Antrim MOI 0.1 -0.9 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.9 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.2 compare
carbon source Carbon source L-Citrulline 5 mM +0.9 +2.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.9 +2.7 compare
soil soil sample 2; outgrowth in LB +0.9 +1.6 compare
phage P. simiae Grant Run MOI 10 +0.9 +2.0 compare
seeds Growth on radish seeds for 72 hours +0.9 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.1 +1.6 compare
stress Gentamicin 0.008 mg/ml +1.1 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +1.7 compare