Fitness data for PS417_24820 in Pseudomonas simiae WCS417

ethanolamine ammonia-lyase
SEED: Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)
KEGG: ethanolamine ammonia-lyase large subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility inner cut, LB soft agar motility assay -0.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
stress Doxycycline hyclate 0.001 mg/ml -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.2 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.4 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
soil soil sample 3; outgrowth in LB +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.9 compare
soil soil sample 2; outgrowth in LB +0.5 +1.2 compare
soil soil sample 5; outgrowth in LB +0.5 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
soil soil sample 4; outgrowth in LB +0.6 +1.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.8 +1.5 compare
root root sample 6; outgrowth in LB +0.8 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.9 +2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.9 +1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.4 compare