Fitness data for PS417_24410 in Pseudomonas simiae WCS417

ligand-gated channel
SEED: Hemophore HasA outer membrane receptor HasR / Iron siderophore receptor protein
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.0 compare
stress Gentamicin 0.008 mg/ml -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -2.0 compare
phage Wcs_1 -0.2 -1.6 compare
phage P. simiae ORA MOI 0.1 -0.2 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.2 -1.6 compare
carbon source L-Malic (C) -0.2 -1.7 compare
nitrogen source Cytosine (N) -0.2 -1.6 compare
soil soil sample 5; outgrowth in LB -0.2 -1.1 compare
soil soil sample 4; outgrowth in LB +0.2 +1.2 compare
soil soil sample 3; outgrowth in LB +0.2 +1.2 compare
liquid stress Scopoletin 3 mM; liquid stress +0.2 +1.6 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 +1.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.3 compare
carbon source L-Valine (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare