Fitness data for PS417_24385 in Pseudomonas simiae WCS417

tRNA (uracil-5-)-methyltransferase
SEED: tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35)
KEGG: tRNA (uracil-5-)-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
liquid stress Fraxetin 3 mM; liquid stress -1.8 -6.4 compare
liquid stress Fraxetin 3 mM; liquid stress -1.5 -5.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -3.9 compare
liquid stress Fraxetin 3 mM; liquid stress -1.5 -4.3 compare
liquid stress Scopoletin 3 mM; liquid stress -1.4 -6.0 compare
liquid stress Fraxetin 3 mM; liquid stress -1.2 -5.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.3 compare
liquid stress 80% Methanol 3 mM; liquid stress -1.0 -3.3 compare
solid stress 80% Methanol 1 mM; solid stress -0.9 -4.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -2.7 compare
liquid stress Scopoletin 3 mM; liquid stress -0.9 -2.2 compare
liquid stress Scopoletin 3 mM; liquid stress -0.9 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.1 compare
soil soil sample 3; outgrowth in LB -0.8 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.1 compare
motility inner cut, LB soft agar motility assay -0.8 -3.4 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.4 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.8 -3.7 compare