Fitness data for PS417_24345 in Pseudomonas simiae WCS417

ubiquinol oxidase subunit II
SEED: putative Cytochrome bd2, subunit II
KEGG: cytochrome bd-I oxidase subunit II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress Choline Lysine 25 mM -1.6 -3.8 compare
stress L-Lysine 60 mM -1.2 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
soil soil sample 6; outgrowth in LB -0.9 -2.1 compare
soil soil sample 5; outgrowth in LB -0.9 -1.2 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.7 compare
seeds Growth on radish seeds for 72 hours -0.8 -2.1 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 -3.2 compare
seeds Growth on radish seeds for 72 hours -0.8 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.8 -3.1 compare
solid stress Fraxetin 2 mM; solid stress -0.7 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.6 compare
carbon source L-Valine (C) +1.0 +3.4 compare