Fitness data for PS417_23945 in Pseudomonas simiae WCS417

ornithine aminotransferase
SEED: Osmotically inducible protein Y precursor
KEGG: hyperosmotically inducible periplasmic protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
liquid stress Fraxetin 2 mM; liquid stress -0.5 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.3 compare
stress Doxycycline hyclate 0.001 mg/ml -0.4 -2.2 compare
phage JP1 MOI 1 -0.4 -1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.8 compare
phage JP1 MOI 1 +0.4 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.4 +1.5 compare
carbon source acetate (C) +0.4 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.4 +2.6 compare
soil soil sample 3; outgrowth in LB +0.5 +1.6 compare
phage P. simiae ORA MOI 0.1 +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
soil soil sample 5; outgrowth in LB +0.5 +2.1 compare