Fitness data for PS417_23870 in Pseudomonas simiae WCS417

aminotransferase
SEED: Valine--pyruvate aminotransferase (EC 2.6.1.66)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage JP1 MOI 0.1 -0.7 -2.7 compare
phage P. simiae OR Antrim MOI 10 -0.5 -2.7 compare
phage P. simiae Grant Run MOI 10 -0.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.4 compare
phage JP1 MOI 10 -0.4 -1.9 compare
nitrogen source Adenine (N) -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.0 compare
soil soil sample 2; outgrowth in LB -0.3 -1.3 compare
stress Spectinomycin 0.4 mg/ml +0.3 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
phage P. simiae Grant Run MOI 10 +0.4 +1.9 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +1.6 compare
stress Gentamicin 0.008 mg/ml +0.4 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.9 compare
phage P. simiae OR Antrim MOI 1 +0.5 +2.3 compare